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View Full Version : Latest Protein BMs 8-20-2002


IronBits
08-21-2002, 09:21 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 51780 structures over 27689 seconds.
Protein Size: 69AA

Structures Per Second: 1.87
Structures Per Minute: 112.2
Structures Per Hour : 6732
Structures Per Day : 161573

OS : Windows 98 MHz: ???
CPU: AuthenticAMD AMD Athlon(tm) XP 1900+
Client Switches: -df -rt -g 15
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FoBoT
08-21-2002, 10:50 AM
so its among the fastest we have seen yet? true?
time to crunch some DF ;)
guru
08-21-2002, 07:46 PM
Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 15600 structures over 7749 seconds.
Protein Size: 69AA

Structures Per Second: 2.02
Structures Per Minute: 120.9
Structures Per Hour : 7255
Structures Per Day : 174117

OS : Microsoft Windows XP MHz: 1468
CPU: AMD Athlon(tm) processor
Client Switches: -df -qt -rt -g 30-p -1
Chinasaur
08-21-2002, 08:50 PM
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Distributed Folding Linux Benchmark Script V1.0

Sample Size: 32740 structures over 17166 seconds.

Structures Per Second: 1.91
Structures Per Minute: 114.44
Structures Per Hour: 6866.13
Structures Per Day: 164787.12

Linux OS - Running Kernel Version 2.4.18
AMD Athlon(tm) Processor @ 1533mhz (256 KB cache)

Debian Woody, 512MB, Dual XP1800, S2460
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:cheers:
Paratima
08-21-2002, 09:17 PM
And this isn't even my fastest box! :p Definitely gonna pile up some points...

Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 99885 structures over 45209 seconds.
Protein Size: 69AA

Structures Per Second: 2.21
Structures Per Minute: 132.6
Structures Per Hour : 7954
Structures Per Day : 190893

OS : Microsoft Windows 2000 MHz: 1587
CPU: AMD Athlon(tm) XP 1900+
Client Switches: -df -qt -rt -s 7800
FoBoT
08-21-2002, 11:39 PM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 33285 structures over 21139 seconds.
Protein Size: 69AA

Structures Per Second: 1.57
Structures Per Minute: 94.5
Structures Per Hour : 5669
Structures Per Day : 136056

OS : Microsoft Windows XP MHz: 1794
CPU: Intel(R) Pentium(R) 4 CPU 1.80GHz
Client Switches: -df -qt -rt -s 1000
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that is 256MB sdram

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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 9680 structures over 15127 seconds.
Protein Size: 69AA

Structures Per Second: 0.64
Structures Per Minute: 38.4
Structures Per Hour : 2305
Structures Per Day : 55322

OS : Microsoft Windows XP MHz: 597
CPU: GenuineIntel x86 Family 6 Model 8 Stepping 3
Client Switches: -df -qt -rt -s 1000
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that is 128MB sdram celeron
MAD-ness
08-22-2002, 01:40 AM
With the RAM switch, it appears to the be the fastest ever (though it has been a while since the start, don't quote me on that).

Please keep the benchmarks coming in, I am gonna collect them again. Hopefully get a large sample and then one more large sample on one of the remaining CASP5 proteins (since it was extended) and maybe there will be enough data for smart hardware folks to make some useful analysis.

Or not. :)
Nitrousine
08-22-2002, 03:41 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 86960 structures over 72284 seconds.
Protein Size: 69AA

Structures Per Second: 1.20
Structures Per Minute: 72.2
Structures Per Hour : 4331
Structures Per Day : 103942

OS : Microsoft Windows XP MHz: 899
CPU: AMD Duron(tm) processor
Client Switches: -qf -df -it -rt -g 20 -s 10000
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384MB PC133
pointwood
08-22-2002, 04:18 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 94640 structures over 84316 seconds.
Protein Size: 69AA

Structures Per Second: 1.12
Structures Per Minute: 67.3
Structures Per Hour : 4041
Structures Per Day : 96979

OS : Microsoft Windows 2000 MHz: 996
CPU: Intel(R) Pentium(R) III Mobile CPU 1000MHz
Client Switches: -df -rt -s 1000
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It's A Dell Laptop with 512MB memory.
Digital Parasite
08-22-2002, 07:47 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 46500 structures over 49395 seconds.
Protein Size: 69AA

Structures Per Second: 0.94
Structures Per Minute: 56.5
Structures Per Hour : 3392
Structures Per Day : 81400

OS : Microsoft Windows XP MHz: 799
CPU: GenuineIntel x86 Family 6 Model 8 Stepping 3
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PIII - 800EB
Digital Parasite
08-23-2002, 03:04 PM
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Distributed Folding Windows dfGUI v1.8 Benchmark

Sample Size : 78600 structures over 73446 seconds.
Protein Size: 69AA

Structures Per Second: 1.07
Structures Per Minute: 64.2
Structures Per Hour : 3854
Structures Per Day : 92500

OS : Windows 2000 MHz: 863
CPU: GenuineIntel x86 Family 6 Model 8 Stepping 3
Client Switches: -rt -s 2500
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TheOtherPhil
08-23-2002, 05:52 PM
Now this is interesting....2 machines running almost identical specs except one is Win2K pro and the other is XP Pro. Both are dual XP1800's and the clients are installed as a service. I have XP Pro set to optimise for services and 2K set to optimise for applications.


2K Pro, CPU0

Sample Size : 66250 structures over 35115 seconds.
Protein Size: 69AA

Structures Per Second: 1.89
Structures Per Minute: 113.2
Structures Per Hour : 6792
Structures Per Day : 163007

OS : Microsoft Windows 2000
CPU: AMD Athlon(tm) MP 1800+

2K Pro, CPU1

Sample Size : 65900 structures over 35104 seconds.
Protein Size: 69AA

Structures Per Second: 1.88
Structures Per Minute: 112.6
Structures Per Hour : 6759
Structures Per Day : 162215

OS : Microsoft Windows 2000
CPU: AMD Athlon(tm) MP 1800+


XP Pro, CPU0

Sample Size : 73850 structures over 35288 seconds.
Protein Size: 69AA

Structures Per Second: 2.09
Structures Per Minute: 125.6
Structures Per Hour : 7539
Structures Per Day : 180934

OS : Microsoft Windows XP
CPU: AMD Athlon(tm) MP 1800+

XP Pro, CPU1

Sample Size : 73050 structures over 35280 seconds.
Protein Size: 69AA

Structures Per Second: 2.07
Structures Per Minute: 124.2
Structures Per Hour : 7454
Structures Per Day : 178898

OS : Microsoft Windows XP
CPU: AMD Athlon(tm) MP 1800+
MAD-ness
08-23-2002, 06:51 PM
That *is* interesting. :)
trif
08-23-2002, 07:29 PM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 92900 structures over 69133 seconds.
Protein Size: 69AA

Structures Per Second: 1.34
Structures Per Minute: 80.7
Structures Per Hour : 4842
Structures Per Day : 116201

OS : Windows 98 MHz: ???
CPU: AuthenticAMD AMD Duron(tm) Processor
Client Switches: -df -qt -rt -g 100-s 1000
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1 GHz Duron
pfb
08-24-2002, 09:54 AM
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Distributed Folding Windows dfGUI v1.8 Benchmark

Sample Size : 69795 structures over 29796 seconds.
Protein Size: 69AA

Structures Per Second: 2.34
Structures Per Minute: 140.6
Structures Per Hour : 8434
Structures Per Day : 202427

OS : Windows XP MHz: 2708
CPU: Intel(R) Pentium(R) 4 CPU 2.40GHz
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running as a service with the useram=1 option
trif
08-24-2002, 01:05 PM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 60000 structures over 30118 seconds.
Protein Size: 69AA

Structures Per Second: 1.99
Structures Per Minute: 119.7
Structures Per Hour : 7179
Structures Per Day : 172306

OS : Windows 98 MHz: ???
CPU: AuthenticAMD AMD Athlon(tm) XP 1600+
Client Switches: -df -qt -rt -g 100-s 1000
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CPU not overclocked, runs at 1.4 GHz, DDR2100, Win98se
Kosh
08-24-2002, 01:46 PM
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Distributed Folding Linux Benchmark Script V1.0

Sample Size: 90025 structures over 44801 seconds.

Structures Per Second: 2.01
Structures Per Minute: 120.57
Structures Per Hour: 7233.99
Structures Per Day: 173615.76

Linux OS - Running Kernel Version 2.4.19-gentoo-r7
AMD Athlon(TM) XP1600+ @ 1410mhz (256 KB cache)
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Distributed Folding Linux Benchmark Script V1.0

Sample Size: 352775 structures over 214146 seconds.

Structures Per Second: 1.65
Structures Per Minute: 98.84
Structures Per Hour: 5930.49
Structures Per Day: 142331.76

Linux OS - Running Kernel Version 2.4.18
Intel(R) Pentium(R) III CPU family 1266MHz @ 1273mhz (512 KB cache)
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Distributed Folding Linux Benchmark Script V1.0

Sample Size: 37700 structures over 30411 seconds.

Structures Per Second: 1.24
Structures Per Minute: 74.38
Structures Per Hour: 4462.86
Structures Per Day: 107108.64

Linux OS - Running Kernel Version 2.4.19-gentoo-r7
Celeron (Coppermine) @ 1010mhz (128 KB cache)
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Distributed Folding Linux Benchmark Script V1.0

Sample Size: 308800 structures over 285952 seconds.

Structures Per Second: 1.08
Structures Per Minute: 64.79
Structures Per Hour: 3887.65
Structures Per Day: 93303.60

Linux OS - Running Kernel Version 2.4.19-gentoo-r7
AMD Duron(tm) Processor @ 807mhz (64 KB cache)
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All -rt
PackSwede
08-24-2002, 06:21 PM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 98290 structures over 87966 seconds.
Protein Size: 69AA

Structures Per Second: 1.12
Structures Per Minute: 67.0
Structures Per Hour : 4023
Structures Per Day : 96540

OS : Microsoft Windows XP MHz: 1395
CPU: Intel(R) Pentium(R) 4 CPU 1400MHz
Client Switches: -df -rt -s 4000
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This computer has 256 Mb of RDRAM and is used for lots of other stuff (e.g. typing this)

This setup (RDRAM) was much more competitive before the extram ram switch came along...

/Thomas
pizzaking
08-25-2002, 06:56 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 135470 structures over 93407 seconds.
Protein Size: 69AA

Structures Per Second: 1.45
Structures Per Minute: 87.0
Structures Per Hour : 5221
Structures Per Day : 125308

OS : Microsoft Windows XP MHz: 1210
CPU: AMD Duron(tm) Processor
Client Switches: -df -qt -rt -i f
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512MB PC-133


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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 84900 structures over 55262 seconds.
Protein Size: 69AA

Structures Per Second: 1.54
Structures Per Minute: 92.2
Structures Per Hour : 5531
Structures Per Day : 132738

OS : Microsoft Windows 2000 MHz: 1194
CPU: AMD Duron(tm) Processor
Client Switches: -df -qt -rt -i f
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256MB PC-100


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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 98370 structures over 63471 seconds.
Protein Size: 69AA

Structures Per Second: 1.55
Structures Per Minute: 93.0
Structures Per Hour : 5579
Structures Per Day : 133906

OS : Microsoft Windows 2000 MHz: 1202
CPU: AMD Duron(tm) processor
Client Switches: -df -qt -rt -i f
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128MB PC-133
Darkness Productions
08-25-2002, 09:32 AM
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Distributed Folding Windows dfGUI v1.7 Benchmark

Sample Size : 71700 structures over 31770 seconds.
Protein Size: 69AA

Structures Per Second: 2.26
Structures Per Minute: 135.4
Structures Per Hour : 8125
Structures Per Day : 194992

OS : Microsoft Windows 2000 MHz: 1614
CPU: AMD Athlon(tm) XP 1900+
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Client flags - -df -qt -rt -g 100 -s 7900 -p 10

It's actually an 1800+, OCd. 256MB of PC2100 DDR.
zoom
08-26-2002, 09:38 AM
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Distributed Folding Windows dfGUI v1.8 Benchmark

Sample Size : 64965 structures over 33854 seconds.
Protein Size: 69AA

Structures Per Second: 1.92
Structures Per Minute: 115.1
Structures Per Hour : 6908
Structures Per Day : 165799

OS : Windows XP MHz: 1400
CPU: AMD Athlon(tm) Processor
Client Switches: -df -qt -rt
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