AMD_is_logical
07-17-2003, 03:00 PM
I got an "unable to open trajectory" error while crunching generation 251 -- that's right, generation 251. :eek:
Here is the entry from the error.log file:
ERROR: [001.001] {trajtools.c, line 3480} Unable to open trajectory distribution file handle_protein_251.trj
FATAL ERROR: [002.003] {foldtrajlite2.c, line 4700} Unable to read trajectory distribution, please create a new one
And then the client sat there, presumably asking for an Enter to continue (there's no monitor or keyboard on these nodes).
Here is filelist.txt:
./fold_5_handle_0_handle_protein_249.log.bz2
./handle_5_handle_protein_249_0000001.val
./fold_5_handle_5_handle_protein_250.log.bz2
./handle_5_handle_protein_250_0000006.val
CurrentStruc 5 1 126 251 1 0 10000000.000 10000000.000 -10000000.000 0.000 0.000 1.700 3.200 2690.317 ---------------------HHHHHHHHH-------HHHHH----------------HHHHH----------------HHHHH--HHHH------
db0ce216386579ade69f3485fee79457
This was on a linux node (single processor Athlon) with the following switches:
./foldtrajlite -f protein -n native -rt -if -qt -p0 -g5
I have a number of these nodes going 24/7, and other than this one glitch they've been trouble-free.
Here is the entry from the error.log file:
ERROR: [001.001] {trajtools.c, line 3480} Unable to open trajectory distribution file handle_protein_251.trj
FATAL ERROR: [002.003] {foldtrajlite2.c, line 4700} Unable to read trajectory distribution, please create a new one
And then the client sat there, presumably asking for an Enter to continue (there's no monitor or keyboard on these nodes).
Here is filelist.txt:
./fold_5_handle_0_handle_protein_249.log.bz2
./handle_5_handle_protein_249_0000001.val
./fold_5_handle_5_handle_protein_250.log.bz2
./handle_5_handle_protein_250_0000006.val
CurrentStruc 5 1 126 251 1 0 10000000.000 10000000.000 -10000000.000 0.000 0.000 1.700 3.200 2690.317 ---------------------HHHHHHHHH-------HHHHH----------------HHHHH----------------HHHHH--HHHH------
db0ce216386579ade69f3485fee79457
This was on a linux node (single processor Athlon) with the following switches:
./foldtrajlite -f protein -n native -rt -if -qt -p0 -g5
I have a number of these nodes going 24/7, and other than this one glitch they've been trouble-free.