Any feedback (everything ok so far, wtf is going on, I don't like it, etc), yet?
Type: Posts; User: m0ti
Any feedback (everything ok so far, wtf is going on, I don't like it, etc), yet?
Bug found <minor>:
Occassionally empty dfq files are created by the uploader and placed in storage. These files seem to be 71 bytes long (shows up in Windows explorer as 1k), and cause an error...
Here's my latest graph:
Hi,
dfQ Phase II is about ready. I would have liked to finish up everything (stats, service install, perhaps compiling it on linux and then for windows, ...), but I've decided that it's better to...
running fine here. got a 5.55 energy at gen 5 already. hope that corresponds to a low RMSD.
Windows: Link for download
That's probably supposed to be December and not November
Hmm... I really should pay more attention.
Sorry! :o
perhaps dfGui?
yup, it is Windows.
Got the new client and it seems to be working again.
Thanks! :D
I'm getting this error popping up on me on occassion now and again also with -i f flag and also with -u t flag. Everything runs fine for a while but then it starts up. And I'm using calls to...
Just of interest what would be the predicted best RMSD we would get for this protein? What would a "good result" (instrudy leading/compared to phase I/etc) be?
I remember that during Phase I...
Mon Nov 17 20:33:14 2003 FATAL ERROR: [067:001] {mmdbapi1.c, line 1190} FindPath failed in LoadDict
When trying to upload
seems to have worked itself out, whatever it was. :D
I'm unable to upload with -u t switch. It says that it's unable to check for new versions and exits out. Error.log is empty.
I agree. It's also the most trivial to implement, which is always a bonus.
P.S.
I really don't care how the stats are calculated, personally. I just think it's a shame if we're losing...
I guess the only "fair" way would be to normalize by the progress of the entire project for the protein. That's because it's the only way to test it over the hardware that people are actually using....
"I heard someone tried the monkeys-on-typewriters bit trying for the plays of W. Shakespeare, but all they got was the collected works of Francis Bacon."
- Bill Hirst
I guess a fair way might be to do Generation Points * CPU-TIME where cpu time is the actual amount of time spent by the program (e.g. getThreadTime() on NT, times() in Unix or similar method calls)....
Any chance of having distribution graphs of the rms and energy values for submitted proteins on the stats page?
Just think it could be something interesting to have a look at.
As well as: could...
I've actually expounded the idea quite a lot further, take a look here (well, they're solving for k * 2^n - 1, so just replace the -1 with +1 where appropriate).
Creating a large list of rules...
Please check out my last post here and let me know if this is a good idea (should give a speed boost of 2x)
Please check out my last post here and let me know if this is a good idea (should give a speed boost of 2x... and not just in sieving)
Explanation of the maths:
First a note on mod 6 math:
Arrange the numbers into rows as follows
1 7 13 19 ...
2 8 14 20 ...
3 9 15 21 ...
4 10 16 22 ...
hi,
not an SB participant or anything and I'm pretty sure you've got much much better sieving in place than my simple suggestion.
In any case:
Looking at numbers modulo 6, we can quickly see...