Results 1 to 33 of 33

Thread: CASP5 Protein #2 Benchmarks

  1. #1

    Current Protein (CASP5 Protein #2) Benchmarks

    Now that the protein change-over has occured, I figured it is time to start a thread where benchmarks for this protein can be submitted.

    If someone feels like doing something fancy with benchmarks, it would be greatly appreciated but until they do, I will collect them by hand and toss them up on a page. Here is a sample from the last protein:

    http://www.geocities.com/m4dn3ss2000...ultsTable.html

    You might get pop-ups or other annoying crap there, I am not sure.

    I will try to get the benchmarks for this protein up before the end of the week and I should be able to put them at www.teamstirfry.com so that you don't have to deal with Yahoo/GeoShitties.

    Please run the new protein for several hours (atleast two or so) and preferably run it overnight and submit them tommorow.

    Please include information from your system that the benchmark script might not include, such as processor model (especially with P3s and Celerons in different models), cache size and fsb (if these vary for a particular CPU, like the aforementioned P3 lines).

    Thanks.

  2. #2
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 10100 structures over 35640 seconds.

    Structures Per Second: 0.28
    Structures Per Minute: 17.1
    Structures Per Hour : 1024
    Structures Per Day : 24565

    OS : Microsoft Windows XP MHz: 801
    CPU: GenuineIntel x86 Family 6 Model 8 Stepping 3
    ------------------------------------------------------------
    ^^^ P3-800

    ------------------------------------------------------------
    Distributed Folding Linux Benchmark Script V1.0

    Sample Size: 20955 structures over 61815 seconds.

    Structures Per Second: 0.34
    Structures Per Minute: 20.34
    Structures Per Hour: 1220.38
    Structures Per Day: 29289.12

    Linux OS - Running Kernel Version 2.4.17
    Celeron (Coppermine) @ 908mhz (128 KB cache)
    ------------------------------------------------------------

  3. #3
    Junior Member PackSwede's Avatar
    Join Date
    Jun 2002
    Location
    Umea, Sweden
    Posts
    14
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 42905 structures over 76473 seconds.

    Structures Per Second: 0.56
    Structures Per Minute: 33.7
    Structures Per Hour : 2020
    Structures Per Day : 48475

    OS : Microsoft Windows XP MHz: 1395
    CPU: Intel(R) Pentium(R) 4 CPU 1400MHz
    ------------------------------------------------------------

    Almost double the production compared to the 182AA Beast

    /PackSwede

  4. #4
    Ancient Haggis Hound Angus's Avatar
    Join Date
    Jan 2002
    Location
    Seattle/Norfolk Island
    Posts
    828
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 12725 structures over 48562 seconds.

    Structures Per Second: 0.26
    Structures Per Minute: 15.7
    Structures Per Hour : 943
    Structures Per Day : 22643

    OS : Windows 98 MHz: 707
    CPU: GenuineIntel x86 Family 6 Model 8 Stepping 3
    ------------------------------------------------------------
    Celeron 566 OC to 708, 128MB PC100

  5. #5
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 45700 structures over 74254 seconds.

    Structures Per Second: 0.62
    Structures Per Minute: 36.9
    Structures Per Hour : 2216
    Structures Per Day : 53178

    OS : Microsoft Windows 2000 MHz: 1495
    CPU: Intel(R) Pentium(R) 4 CPU 1.50GHz
    ------------------------------------------------------------

  6. #6
    Junior Member
    Join Date
    Jun 2002
    Location
    Poteau, OK
    Posts
    5

    Mo Benchmarks

    Laptop...400mhz celeron, 128MB SDRAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.0 Benchmark

    Sample Size: 1410 structures over 9301 seconds.

    Structures Per Second: 0.15
    Structures Per Minute: 9.1
    Structures Per Hour : 546
    Structures Per Day : 13099

    OS : Windows 98 MHz: 397
    CPU: GenuineIntel Intel(r) Celeron(tm) Processor



    Wife's Computer ...800MHZ Duron, 128MB SDRAM

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.0 Benchmark

    Sample Size: 3050 structures over 9484 seconds.

    Structures Per Second: 0.32
    Structures Per Minute: 19.3
    Structures Per Hour : 1159
    Structures Per Day : 27815

    OS : Windows 98 MHz: ???
    CPU: AuthenticAMD AMD Duron(tm) processor
    ------------------------------------------------------------

    My Computer... Dual Athlon MP-2000 1GB ECC reg DDR

    CPU0

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 5550 structures over 10174 seconds.

    Structures Per Second: 0.55
    Structures Per Minute: 32.8
    Structures Per Hour : 1970
    Structures Per Day : 47276

    OS : Microsoft Windows XP MHz: 1680
    CPU: AMD Athlon(TM) XP 1900+
    ------------------------------------------------------------

    CPU1

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 5550 structures over 10167 seconds.

    Structures Per Second: 0.55
    Structures Per Minute: 32.9
    Structures Per Hour : 1976
    Structures Per Day : 47416

    OS : Microsoft Windows XP MHz: 1680
    CPU: AMD Athlon(TM) XP 1900+
    ------------------------------------------------------------

  7. #7
    Ancient Haggis Hound Angus's Avatar
    Join Date
    Jan 2002
    Location
    Seattle/Norfolk Island
    Posts
    828
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 57475 structures over 76018 seconds.

    Structures Per Second: 0.76
    Structures Per Minute: 45.4
    Structures Per Hour : 2722
    Structures Per Day : 65325

    OS : Microsoft Windows 2000 MHz: 1993
    CPU: Intel(R) Pentium(R) 4 CPU 2.00GHz
    ------------------------------------------------------------
    P4 2GHz 512MB RDRAM

  8. #8
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.0 Benchmark

    Sample Size: 23600 structures over 49905 seconds.

    Structures Per Second: 0.47
    Structures Per Minute: 28.4
    Structures Per Hour : 1702
    Structures Per Day : 40858

    OS : Microsoft Windows 2000 MHz: 1025
    CPU: AMD Duron(tm) processor
    ------------------------------------------------------------

    128MB PC133 SDRAM

  9. #9
    Ancient Programmer Paratima's Avatar
    Join Date
    Dec 2001
    Location
    West Central Florida
    Posts
    3,296
    Donald: 256MB - DDR2100
    Distributed Folding Windows dfGUI v1.1 Benchmark
    Sample Size: 60350 structures over 91554 seconds.

    Structures Per Second: 0.66
    Structures Per Minute: 39.6
    Structures Per Hour : 2375
    Structures Per Day : 56992

    OS : Microsoft Windows 2000 MHz: 1587
    CPU: AMD Athlon(tm) XP 1900+ (actually an 1800 lightly OC'd)
    ------------------------------------------------------------
    Daisy: 256MB - DDR2100
    Distributed Folding Windows dfGUI v1.1 Benchmark
    Sample Size: 46750 structures over 74587 seconds.

    Structures Per Second: 0.63
    Structures Per Minute: 37.6
    Structures Per Hour : 2258
    Structures Per Day : 54196

    OS : Microsoft Windows 2000 MHz: 1465
    CPU: AMD Athlon(tm) XP 1700+

  10. #10
    Here are the submitted entries in a chart:

    http://www.geocities.com/m4dn3ss2000/CASP5Protein2.html

    I guessed on the Duron cache size since I can't remember and I might have goofed a few other details on architectures, as always, when I had to guess (or was just brain-dead).

    Could definitely use some more submissions.

    Gonna see if I can talk jdhaenens into running his again, he has interesting hardware but his sample set was relatively small (maybe an hour or so of run time) and if I am going to manually enter this data for the moment, I wanna make sure it is pretty accurate.

    Anyone have anything interesting to submit that isn't really "covered" by benches already submitted?

    A highly overclocked P4, a highly overclocked AthlonXP, a couple Tbirds, a classic Athlon or two, and a tualatin P3 would all be nice. Haven't seen the ubiquitous Celeron300a @ 450 yet either on this protein.

  11. #11
    Junior Member
    Join Date
    May 2002
    Location
    Singapore
    Posts
    14
    Pentium III 450 (4.5x100), 512k L2 [Katmai]
    WinNT 4.0SP6 (~449Mhz)
    256Mb PC100
    Running as a service
    -----
    Structures Per Second: 0.21
    Structures Per Minute: 12.6
    Structures Per Hour : 758
    Structures Per Day : 18202

    Sample size : 21850 structures

    ======


    Pentium III 866 (6.5x133),256k L2 [Coppermine]
    WinNT 4.0SP6 (~864Mhz)
    192Mb PC133
    Running as a service
    -----
    Structures Per Second: 0.34
    Structures Per Minute: 20.3
    Structures Per Hour : 1220
    Structures Per Day : 29281

    Sample size : 35100 structures

    =====


    Pentium III 866 (6.5x133),256k L2 [Coppermine]
    Win2K (~863Mhz)
    128Mb PC133
    Running as a service
    -----
    Structures Per Second: 0.32
    Structures Per Minute: 19.3
    Structures Per Hour : 1160
    Structures Per Day : 27851

    Sample size : 32350 structures

  12. #12
    Senior Member
    Join Date
    Apr 2002
    Location
    Santa Barbara CA
    Posts
    355
    first df client
    Sample size: 10178 structures over 36720 seconds

    Structures per minute: 16.6
    Structures per hour: 998
    Structures per day: 23948

    second df client
    Sample size: 10012 structures over 36900 seconds

    Structures per minute: 16.3
    Structures per hour: 977
    Structures per day: 23443

    OS: OS 10.1.5
    CPU dual 800MHz G4

    Not the most cost effective box for farming.

  13. #13
    Junior Member Eaglechild's Avatar
    Join Date
    May 2002
    Location
    Washington State
    Posts
    14
    iBook 600mhz (notebook)
    Mac OS-X 256k L2 cache
    per sec: .158
    per min: 9.5
    per hour: 570
    per day: 13,680

    Power Mac 800mhz (single proc)
    Mac OS-X 256k L2 cache
    per sec: .23
    per min: 14
    per hr: 845
    per day: 20280

    Celeron 1.3 ghz
    Windows XP 256k L2 cache
    per sec: .319
    per min: 19.16
    per hr: 1150
    per day: 27600

    Athlon 1900+
    Mandrake Linux
    per sec: .56
    per min: 33.66
    per hr: 2020
    per day: 48,480

  14. #14
    Junior Member
    Join Date
    Jun 2002
    Location
    Poteau, OK
    Posts
    5
    Mad-ness Here they are:

    Dual Athlon MP-2000 1GB ECC reg DDR (PC 2100)

    CPU 0

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 47400 structures over 84820 seconds.

    Structures Per Second: 0.56
    Structures Per Minute: 33.6
    Structures Per Hour : 2013
    Structures Per Day : 48315

    OS : Microsoft Windows XP MHz: 1680
    CPU: AMD Athlon(TM) XP 1900+

    CPU 1

    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 46950 structures over 84807 seconds.

    Structures Per Second: 0.55
    Structures Per Minute: 33.2
    Structures Per Hour : 1994
    Structures Per Day : 47845

    OS : Microsoft Windows XP MHz: 1680
    CPU: AMD Athlon(TM) XP 1900+

    I'd overclock it but for every minute I spend tweaking, I'd lose at least 34 folds (not counting the shutdown and restart time).

    Jim

  15. #15
    Ancient Programmer Paratima's Avatar
    Join Date
    Dec 2001
    Location
    West Central Florida
    Posts
    3,296
    Huey, Dewey, Louie, & Grandma: Dell wkstations
    Distributed Folding Windows dfGUI v0.6 Benchmark
    Sample Size: 2600 structures over 5431 seconds.
    Structures Per Second: 0.49
    Structures Per Minute: 29.2
    Structures Per Hour : 1752
    Structures Per Day : 42052
    OS : Microsoft Windows 2000 MHz: 1495
    CPU: Intel(R) Pentium(R) 4 CPU 1.50GHz
    ------------------------------------------------------------
    Scrooge: Athlon Classic - SuSE Linux
    Thu Jun 13 07:21:24 EDT 2002
    Distributed Folding Linux Benchmark Script V1.1
    Sample Size: 49640 structures over 145761 seconds.
    Structures Per Second: 0.34
    Structures Per Minute: 20.43
    Structures Per Hour: 1226.01
    Structures Per Day: 29424.24
    Linux OS - Running Kernel Version 2.4.10-4GB
    AMD Athlon(tm) Processor @ 848mhz (512 KB cache)

  16. #16
    Junior Member
    Join Date
    May 2002
    Location
    Singapore
    Posts
    14
    More results :

    Athlon XP 1500+ (10x163)
    WinME
    256Mb DDR266
    Console version off commandline
    -----
    Structures Per Second: 0.75
    Structures Per Minute: 45.0
    Structures Per Hour : 2700
    Structures Per Day : 64780

    Sample size : 120200 structures

    ======


    Athlon Thunderbird 1.0G (10x153)
    Win98SE
    256Mb PC133
    Console version off commandline
    -----
    Structures Per Second: 0.67
    Structures Per Minute: 40.0
    Structures Per Hour : 2402
    Structures Per Day : 57640

    Sample size : 109300 structures

  17. #17
    Thanks for the extra submissions guys. Some interesting boxen there.

    The G4s seem to do about the same per/cycle as the P3 just from glancing at the submitted benchmarks. The Macs don't scale to the same sort of frequencies as the K7 and the P4 cored chips, but considering how poorly the Macs do on some DC projects, those results don't look too bad to me. Not like RC5 results on them, of course, but not horrible either.

    If my DSL stays up tonight I will add these submissions to the page as well as trying to get the page put up on a 'real' web site. I just added in my 3 machines and with the ones just submitted that should give us ~20 for this protein.

  18. #18
    384 Mb RAM 100MHz
    Attached Files Attached Files

  19. #19
    Member
    Join Date
    Jun 2002
    Location
    Atlanta, GA
    Posts
    35

    My Fairly Fancy Desktop at Work..

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 126808 structures over 165279 seconds.

    Structures Per Second: 0.77
    Structures Per Minute: 46.0
    Structures Per Hour : 2762
    Structures Per Day : 66289

    OS : Microsoft Windows XP MHz: 2193
    CPU: Intel(R) Pentium(R) 4 CPU 2.20GHz
    ------------------------------------------------------------

    MashRinx

  20. #20
    ok, added in new benchmarks.

    Forgot to add in jdhaeden's laptop and I think someone at Ars posted a K6-3 bench and I have had my celeron266 running for 24 hours, but oh well, next protein I will grab all them, the info is here for anyone who is really interested anyways.

    Fastest bench submitted here was MashRinx's P4 2.2ghz Northwood.

    Collin's two heavily overclocked AMD CPUs had great results though. I don't know if I got the stock fsb/multiplier info right on those cpus though Collin. I guessed on the XP1500+ frequency since it is one of the XP models I do not know in terms of frequency. I assumed that you left the multipliers locked and went for straight FSB overclocking.

    The processors that have "(1)" or "(2)" in the Processor name were the first and second cpus of duallies. This isn't the most efficient way of doing this, but I thought the info on how the second cpu performs (reallly close to the first CPU and not much slower than a single CPU set-up) would be useful.

    http://www.geocities.com/m4dn3ss2000/CASP5Protein2.html

    I have sent off the file to pointwood and we will be getting it up on www.teamstirfry.com but I don't know jack about HTML or any other web nonsense (or computers in general) so I don't know exactly how long it will take for us to play email tag over about 10 timezones and get it set up.

    Thanks for the submissions, I will try to get it up faster next week, I had a ton of real life issues this week not to mention no internet access for a while.

  21. #21
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 9149 structures over 88447 seconds.

    Structures Per Second: 0.10
    Structures Per Minute: 6.2
    Structures Per Hour : 372
    Structures Per Day : 8938

    OS : Windows 98 MHz: ???
    CPU: GenuineIntel Intel(r) Celeron(tm) Processor
    ------------------------------------------------------------

  22. #22
    Ancient Programmer Paratima's Avatar
    Join Date
    Dec 2001
    Location
    West Central Florida
    Posts
    3,296
    Hey, thanks, MAD-ness! You're doing a good service here.

    I've already made a couple of changes based on the numbers I've seen and just from the exercise of running the numbers on my own boxen. Very helpful.

    Also toots on the horn for Dyyryath for the Perl script and Digital Parasite for dfGUI, so we can get these measurements to begin with!

  23. #23
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 154475 structures over 155740 seconds.

    Structures Per Second: 0.99
    Structures Per Minute: 59.5
    Structures Per Hour : 3571
    Structures Per Day : 85698

    OS : Microsoft Windows XP MHz: 1579
    CPU: AMD Athlon(tm) XP 1900+
    ------------------------------------------------------------


    XP 1600+ FSB overclock
    FSB 150 MHz

  24. #24
    Junior Member
    Join Date
    Jun 2002
    Location
    Poteau, OK
    Posts
    5
    New Benchmarks after slight FSB overclocking (138 MHZ)...the second service refuses to run above 140 MHZ FSB.

    A7M266-D Mobo dual Athlon MP-2000 1GB ECC Reg DDR Ram

    CPU0

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 13650 structures over 23331 seconds.

    Structures Per Second: 0.59
    Structures Per Minute: 35.2
    Structures Per Hour : 2111
    Structures Per Day : 50662

    OS : Microsoft Windows XP MHz: 1725
    CPU: AMD Athlon(TM) XP 1900+
    ------------------------------------------------------------


    CPU 1

    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 13800 structures over 23328 seconds.

    Structures Per Second: 0.59
    Structures Per Minute: 35.5
    Structures Per Hour : 2130
    Structures Per Day : 51111

    OS : Microsoft Windows XP MHz: 1725
    CPU: AMD Athlon(TM) XP 1900+
    ------------------------------------------------------------

  25. #25
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v1.1 Benchmark

    Sample Size: 23950 structures over 32957 seconds.

    Structures Per Second: 0.73
    Structures Per Minute: 43.6
    Structures Per Hour : 2617
    Structures Per Day : 62820

    OS : Microsoft Windows XP MHz: 2259
    CPU: Intel(R) Pentium(R) 4 CPU 2.26GHz
    ------------------------------------------------------------

  26. #26
    Member
    Join Date
    Jun 2002
    Location
    Atlanta, GA
    Posts
    35
    Hey MAD-ness, would you like some lower level Benchmarks too? I have a few slower machines set up in a closet at home that are crunching away. P2-233's, my wife's using a P2-400, etc.

    Also, at work I'm running on a couple P3-XEONs. I dont know if there's been talk in the past on wether the extra cache makes a different (I haven't been around D.C. much in a while), bu I could submit those if it would help too....

    MashRinx (Kevin)

  27. #27
    Actually, MashRinx, I would LOVE all of those benchmarks if at all possible.

    Someone has asked me about P1/P1MMX CPUs and I only have a P1 200mhz here that I have access to (and keep forgetting to benchmark).

    If I ever figure out what chipset this Celeron266 box I was given has, I will hopefully be able to update it to some sort of P2, so low end P2 numbers would help me personally.

    A lot of people have access to older machines but are not sure if it is worth the effort to set them up. Since DF is pretty much a frequency dependent program, my opinion so far is that if the machines are already running, it is definitely worthwhile. Unlike SETI, for example, you aren't going to murder your average WU time and the production scales pretty well backwards through architectures (i.e. the performance scales per clock cycle in both directions, reasonably well). Data to confirm this would be great.

    The Xeons...yum. Would really like to see those large cache chips in action. =)

  28. #28
    Member
    Join Date
    Jun 2002
    Location
    Atlanta, GA
    Posts
    35

    Work Machines: Will only be active until later tonight...

    Unfortunately, I can only use these machines for DF until later tonight. This is a mojor DB application used by our company, and there's NO way I am going to run D.C. on these boxes after we get everything up and running, and that will happen early tomorrow AM..... At least I was able to "burn them in" over the weekend, and get some good benchmarks too.....


    Database Server:
    Dell PowerEdge 6400 - Quad Capable machine w/ 2 Procs
    Both Xeon 700's with 2MB of Cache
    1 GB RAM


    Processor #1:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 45 structures over 129 seconds.

    Structures Per Second: 0.35
    Structures Per Minute: 20.9
    Structures Per Hour : 1256
    Structures Per Day : 30140

    OS : Microsoft Windows 2000 MHz: 699
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------


    Processor #2:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 35 structures over 130 seconds.

    Structures Per Second: 0.27
    Structures Per Minute: 16.2
    Structures Per Hour : 969
    Structures Per Day : 23262

    OS : Microsoft Windows 2000 MHz: 699
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------



    Application Servers:


    App Server #1:
    Compaq Proliant ML570 - Quad CPU Machine w/ 2 CPU Installed
    Processors: Xeons w/ 2MB Cache
    1 GB Ram


    Processor #1:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 35 structures over 194 seconds.

    Structures Per Second: 0.18
    Structures Per Minute: 11.1
    Structures Per Hour : 663
    Structures Per Day : 15916

    OS : Microsoft Windows 2000 MHz: 701
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------


    Processor #2:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 55 structures over 206 seconds.

    Structures Per Second: 0.27
    Structures Per Minute: 16.0
    Structures Per Hour : 961
    Structures Per Day : 23068

    OS : Microsoft Windows 2000 MHz: 701
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------



    App Server #2:
    Compaq Proliant ML570 - Quad CPU Machine w/ 2 CPU Installed
    Xeons again....
    1 GB Ram


    Processor #1:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 30 structures over 101 seconds.

    Structures Per Second: 0.38
    Structures Per Minute: 22.5
    Structures Per Hour : 1350
    Structures Per Day : 32400

    OS : Microsoft Windows 2000 MHz: 701
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------


    Processor #2:
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 25 structures over 94 seconds.

    Structures Per Second: 0.27
    Structures Per Minute: 16.1
    Structures Per Hour : 968
    Structures Per Day : 23226

    OS : Microsoft Windows 2000 MHz: 701
    CPU: GenuineIntel x86 Family 6 Model 10 Stepping 4
    ------------------------------------------------------------


    Reporting Servers:


    Reporting Server #1:
    P4 - 1.2
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 15 structures over 33 seconds.

    Structures Per Second: 0.48
    Structures Per Minute: 29.0
    Structures Per Hour : 1742
    Structures Per Day : 41806

    OS : Microsoft Windows 2000 MHz: 1125
    CPU: Intel(R) Pentium(R) III CPU family 1133MHz
    ------------------------------------------------------------


    Reporting Server #2:
    P4 - 1.2
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 20 structures over 56 seconds.

    Structures Per Second: 0.43
    Structures Per Minute: 25.5
    Structures Per Hour : 1532
    Structures Per Day : 36766

    OS : Microsoft Windows 2000 MHz: 1125
    CPU: Intel(R) Pentium(R) III CPU family 1133MHz
    ------------------------------------------------------------


    Hope these help....

    MashRinx

  29. #29
    Member
    Join Date
    Jun 2002
    Location
    Atlanta, GA
    Posts
    35

    Home Boxes....

    The current "home folding fleet" :


    P2-400 w/ approx 128 MB RAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 9 structures over 46 seconds.

    Structures Per Second: 0.20
    Structures Per Minute: 12.3
    Structures Per Hour : 736
    Structures Per Day : 17673

    OS : Microsoft Windows .NET MHz: 398
    CPU: GenuineIntel x86 Family 6 Model 5 Stepping 2
    ------------------------------------------------------------


    DFGUI doesn't pick it up, but this is a P2-233
    64 MB RAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 95 structures over 797 seconds.

    Structures Per Second: 0.12
    Structures Per Minute: 7.3
    Structures Per Hour : 438
    Structures Per Day : 10510

    OS : Windows Millennium Edition MHz: ???
    CPU: GenuineIntel Pentium(r) II Processor
    ------------------------------------------------------------


    DFGUI doesn't pick it up, but this is a P2-233
    64 MB RAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 29 structures over 586 seconds.

    Structures Per Second: 0.05
    Structures Per Minute: 3.1
    Structures Per Hour : 183
    Structures Per Day : 4404

    OS : Windows Millennium Edition MHz: ???
    CPU: GenuineIntel Pentium(r) II Processor
    ------------------------------------------------------------


    This box is a Celleron (sp?)
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 140 structures over 647 seconds.

    Structures Per Second: 0.22
    Structures Per Minute: 13.0
    Structures Per Hour : 783
    Structures Per Day : 18783

    OS : Microsoft Windows XP MHz: 432
    CPU: GenuineIntel x86 Family 6 Model 6 Stepping 5
    ------------------------------------------------------------



    DFGUI doesn't pick it up, but this is a P2-233
    64 MB RAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 34 structures over 315 seconds.

    Structures Per Second: 0.11
    Structures Per Minute: 6.6
    Structures Per Hour : 396
    Structures Per Day : 9507

    OS : Windows 98 MHz: ???
    CPU: GenuineIntel Pentium(r) II Processor
    ------------------------------------------------------------


    P2-400 w/ 192 MB RAM
    ------------------------------------------------------------
    Distributed Folding Windows dfGUI v0.6 Benchmark

    Sample Size: 12 structures over 47 seconds.

    Structures Per Second: 0.26
    Structures Per Minute: 15.3
    Structures Per Hour : 919
    Structures Per Day : 22060

    OS : Microsoft Windows XP MHz: 400
    CPU: GenuineIntel x86 Family 6 Model 5 Stepping 2
    ------------------------------------------------------------


    MashRinx

  30. #30
    Hello MAD-ness,

    Nice idea by the way.

    I thought I'd put it on my home PC's but came up against several problems. Two of them gave values over 500 000 per day ! I believe you have seen this before and know how to correct them ..please advise so I can test them again.

    Another gave a result which looks suspiciously large :-


    Structures Per Second: 0.86
    Structures Per Minute: 51.4
    Structures Per Hour : 3085
    Structures Per Day : 74052 !!

    OS : Microsoft Windows 2000
    CPU: Athlon Tbird 1333 @ 1400


    This looks a bit large !
    -------------------------------------------

    Structures Per Second: 0.99
    Structures Per Minute: 59.5
    Structures Per Hour : 3573
    Structures Per Day : 85758

    OS : Microsoft Windows XP
    CPU: AMD XP 1900 @ 1740 ( Palamino )

    This machine keeps losing DF ! It runs and then when I next look at it it is not there. No error it just stops ???!!!!

    ----------------------------------------------------------

    Structures Per Second: 0.61
    Structures Per Minute: 36.9
    Structures Per Hour : 2214
    Structures Per Day : 53130

    OS : Microsoft Windows 2000
    CPU: AMD Duron Morgan core 1200@1200

    ---------------------------------------------------------------


    One of the machines that gives too large a result is actually the same as the 1333@1400 mentioned above, same chip and same operating system, however it differs in the RAM it has, one has DDR and one has SDRAM. IF I can get that working fine it will be nice to see the difference DDR RAM has on ouput.

    Regards

    Andy

  31. #31
    I got home today and noticed my main machine had not crapped out on me for once and had lasted all day and managed to get over 1 protein run per second !



    I'm running this at a FSB of 145. Interestingly there is a result on the first page where someone reaches this sort of speed with 200MHz or so less, but they are running at a FSB of 150 !

    From all the results generated does it show that FSB has a large effect on the speed of production ?

    I still need to get my DDR and SDRAM boards not to give erronous values so I can see the difference this makes.

    Regards


    Andy

  32. #32
    The DF client primarily requires clock cycles. It spends most of its time traversing a "tree-like" structure...doing pointer traversals. Both of the previous statements are paraphrasings of things Howard has stated. The Alpha is the king of performance in DF, per clock cycle, but this doesn't really say much, as the Alpha seems to be the per clock cycle performance leader in just about any app which is (well) written for it.

    One thing that I noticed with the last set of benchmarks is that a large L2 does not seem to make much difference.

    I have noticed a big performance boost for people with higher FSB speeds (if you have a choice between raising the multiplier or the FSB speed it seems like a no-brainer for almost any app to up the FSB) but the highest submitted FSB speeds on AthlonXP CPUs with DDR SDRAM don't appear to be the highest submitted scores on CPUs in that frequency range.

    I would speculate that memory timings and latencies make a significant difference, but I don't really have any solid evidence to back this up. The P4 seems to do quite well regardless of the memory architecture or speed in use.

    I haven't and won't be able to collect any benches for the current protein because I have no internet connection currently, but if people post them I will, of course, add them to a page at a later date and incorporate them into whatever database I get set up eventually.

  33. #33
    Target Butt IronBits's Avatar
    Join Date
    Dec 2001
    Location
    Morrisville, NC
    Posts
    8,619
    Distributed Folding Windows dfGUI v1.3 Benchmark

    Sample Size: 1875 structures over 1851 seconds.

    Structures Per Second: 1.01
    Structures Per Minute: 60.9
    Structures Per Hour : 3653
    Structures Per Day : 87662

    OS : Microsoft Windows 2000 MHz: 1603
    CPU: AMD Athlon(tm) XP 1900+

Posting Permissions

  • You may not post new threads
  • You may not post replies
  • You may not post attachments
  • You may not edit your posts
  •