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Thread: pseudo-energy calcs are very close

  1. #1
    Senior Member KWSN_Millennium2001Guy's Avatar
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    pseudo-energy calcs are very close

    I've noticed that a lot of people have the exact same values calculated for their best pseudo-energies. Is this a statistical fluke, or are we all coming up with the exact same structures?

  2. #2
    Senior Member KWSN_Millennium2001Guy's Avatar
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    Also, I think you should sort the results in the Best pseudo-energy column by two fields, first by Best pseudo-energy and then by User on top 10 since. The first ones to generate a given Best pseudo-energy should be at the top of the list. You should have to generate a better value to move in front of someone already on the list.

    Great job, btw Howard, as far as I can tell on this side the changeover to the new backend went very smoothly. Of course the DNS changes are a bit irksome at this point, but I trust that with time the DNS changes will replicate and things should be better.

    Ni!

  3. #3
    Senior Member KWSN_Millennium2001Guy's Avatar
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    Now that people are making folds better than 59.989998 pseudo-energy units, the pseudo-energy distribution is more realistic. However, why are there so many users with 59.989998 as their best effort? What makes this number so special?

  4. #4
    I've looked at the values being achieved and they are very modal - in our team apart from 59.989998 seven times, I can see 61.439278 three times, 64.337830 four times, 67.236374 four times, etc

    Looks to me as if the short protein simply doesn't allow many distinct pseudo-energy values...

  5. #5
    I don't know, it just is that way.
    Howard Feldman

  6. #6
    Release All Zigs!
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    KWSN2001,

    Ask the CASP5 people. =)

    Best,

    RS½
    PBB
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